Subscribe to Rahber Scholarships for daily updates by Email
Users' Statistics
Groups
Online
▪
Guests
43
Total Online
43
Total Memb.
1,458
Visitors
1,895,238
Member Stats
New This Year
3
RSS Subscription
Denmark: PhD–scholarships in Computer-Aided Molecular Design
Written by Suleman Shahid
Wednesday, 28 December 2005
PhD scholarship is available at the Department of Chemical Engineering from February 1, 2006.
In this project we will combine cheminformatics (CI) with quantum
mechanical modelling (QM) and grid technology. By combining these
disciplines, it is possible to arrive at final products (deliverables)
that otherwise would be difficult, if at all possible, to obtain. Grid
technology will enable generation of large databases with properties
calculated using QM. With CI it will be possible to find correlations
in the databases for,
building simple empirical relationships between structural
parameters and calculated properties. The relation gives a very fast
model for calculating materials properties. The model can be used for
screening billions of materials combinations for a requested property
building empirical relationships between calculated properties and
measured properties. In this case the calculated properties are used as
descriptors for the CI models
The material systems we will focus on are polymers designed to function
as membranes for nano-filtration or nano-spheres used in delivery of
active ingredients. We have previously generated permeability property
data for polyethylene as a function of its chain length and branching
information. Based on this, we have developed a CI-based model that
captures the information, and used this model to identify a design of
polyethylene that could match the specified product needs. This
approach will now be expanded to incorporate also optical properties,
electrical properties and more types of polymers so that the combined
QM/CI method will have a wider application range. The QM approach is
computationally heavy: Each QM-based calculation needed to generate one
data point for use in CI may take up to 7 days on a powerful PC. By
deploying Grid computing, thousands of such PCs will become available
and thousands of data points are easily obtained. Because of the nature
of chemical products, the number of feasible alternatives will be many
orders of magnitude larger since, as the size of the molecular
structure increases, the number of possible solutions explodes. From
the calculated data points we will therefore develop CI parameters, and
use the CI model to make a coarse grain screening and thereby find the
one thousand most promising candidates, among the billions of material
combinations. This limited set of candidates can then be studied with
QM methods. The overall target of the project is to enable large scale
screening of chemicals using high-performance, high-throughput
computing. The tangible result of this target will be a chemical
database. Yet the underlying algorithms, software components and Grid
enabled products can be reused for other large-scale nano-modeling
projects. In this way an entirely new result from the project will be
the enablement of nano-modeling orders of magnitude above contemporary
capabilities. One key result will be a secure Virtual Machine for
scientific computing which will make thousands of idle PCs truly
available since PC owners, with this technology, need not trust the
scientists they donate processing time to.
Candidates should have a master's degree in engineering or a similar
degree with an academic level equivalent to the master's degree in
engineering. The scholarships for the PhD degree are subject to
academic approval, and the candidates will be enrolled in one of the
general degree programmes of DTU.
Information about the general requirements for enrolment and the
general planning of the scholarship studies is included in the general
rules of DTU, which may be obtained by application to the PhD programme
office at tel: +45 45 25 11 76 or +45 45 25 11 77.
The salary and appointment terms are consistent with the current rules for PhD degree students.
Further information is available by application to the Department
of Chemical Engineering, building 229, DTU, 2800 Kgs. Lyngby, tel:
(+45) 4525 2905, fax: (+45) 4593 2906, e-mail:
Applications with enclosures in triplicate should be submitted to
Assoc. Prof. Jens Abildskov or Prof. Rafiqul Gani at the address
indicated above.
Applications must include a CV and documentation of a completed
master's degree. All interested candidates irrespective of age, gender,
race, religion or ethnic background are requested to apply.
The application must sent to Department of Chemical Engineering and be received no later than January 16, 2006 at 12.00.